Fuji has made a list of lenses that they recommend to use with the 40MP sensor. Many on this forum have rightfully pointed out that the list makes no sense and that lenses not listed will do just fine on the new sensor in terms of resolution. Other have discounted the list as marketing tool to sell lenses.
So why the list?
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If you look closely, these are all lenses that are likely not affected by the AF issues discussed in thread: www.dpreview.com/forums/post/67031917 .
Personally, I would treat this list as a shopping guide for lenses that perform well on new (and old) cameras when it comes to AF. I would be cautious with lenses not on the list. Seems that AF accuracy and reliability (or lack thereof) show more on a 40MP sensor - hence Fuji trying to direct customers to the ones that work best.
Someone pointed out to me that the 16f2.8 does show some of the AF issues but is still on the list. He is right. The reason, I think, is that the issue is less pronounced and that without that lens, Fuji's list of recommended primes would only cover 18mm at the wide end.
Another observation is that the kit lens (18-55) is not on the list. How come the lens is sold in the kit with a 40MP body but doesn't make it onto Fuji's list? The answer seems to be: There is no alternative zoom in that range - and the 16-55 is too premium and expensive to be sold as a kit lens.